Genomics Data Analysis
About Course
Course Overview
Master genomics data analysis including variant calling, whole-genome and whole-exome sequencing analysis, SNP detection, InDels identification, and copy number variant analysis using state-of-the-art bioinformatics pipelines.
What You Will Learn
- NGS data quality control and preprocessing
- Read alignment with BWA and Bowtie2
- Variant calling with GATK and FreeBayes
- Variant annotation with ANNOVAR and VEP
- CNV detection and structural variant analysis
- Filtering and prioritizing clinically relevant variants
Prerequisites
Basic understanding of genetics and genomics. Some command-line experience recommended.
Duration
8 weeks, 3-4 hours per week
Level
Intermediate